ARC 3.5m | TripleSpec

Last updated: Sept 23, 2013 - AB

**Note Currently only the 1.1" slit is available!

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Table of Contents
1. Introduction
2. Usage Overview - What to Expect
3. Sensitivity and Performance
3.1. Spectrograph
3.1.a. GD153B - an empirical case stud
3.1.b. The Limits of Detectability
3.2. Slit Viewer
4. Practical Observing Guide
4.1. Observing Step-by-step
4.2. Source and Guide Star Acquisition
4.2.a. Background Subtraction
4.2.b. Raw Masked Frames
4.3. Spectrum Acquisition
4.4. Seeing and Slit Exchange
4.5. Fowler sampling, read noise, and minimum integration time
4.5.a. Fowler Sampling
4.5.b. Saturation and Integration Time
4.5.c. Exposure sequence details
4.6. Dark Current and Frame Offset Level
4.7. Linearity and Saturation Level
4.8. Focusing
4.9. Spectrograph Frames under the Microscope
4.10. Array Persistence and Faint Targets

5. TUI for TripleSpec
5.1. Guiding
5.1.a. Binning
5.1.b. Sub-framing
5.1.c. Background Subtraction
5.2. TUI Spectrograph Control
5.3. TUI Spectrograph Nod Script
5.4. Data Directories
5.5. Registering Guider frames with Spectrograph Frames
6. Calibration
6.1. Flat fielding and Wavelength Calibration
6.2. Telluric and Flux calibration
6.3. Why no Dark Frames??
7. Data reduction - Tspectool
Appendix
0.1. Revision History
0.2. Timely Updates

1. Introduction

This document describes TripleSpec from a user's perspective. The current version is marginally sufficient to support shared risk observing in Q3 2008. Ultimately this document will serve as the formal user documentation for TripleSpec.

TripleSpec is a cross-dispersed near-infrared spectrograph that provides simultaneous continuous wavelength coverage from 0.95-2.46um in five spectral orders. The instrument is described in more detail in (Wilson et al. 2004). Users of TripleSpec should reference this publication in papers that incorporate TripleSpec results.

The primary configuration of the instrument delivers a spectral resolution of R=3500 in a 1.1 arcsecond slit at 2.1 pixels per slit on the spectrograph array. Slits with 0.7", 1.5", and 1.7" are also available. The instrument contains two independent infrared arrays. One provides a 2048x1024 pixel view of the cross dispersed spectrum. The second provides a 1024x1024 view of a 4'x4' region of the sky, including the spectrograph entrance slit, in the Ks (2.16um) band.

Slits 0.7x43" (120 microns projected width)
1.1x43" (186 microns)
1.5x43" (261 microns)
1.7x43" (290 microns)
Spectral Coverage0.95-2.46um
Spectral Resolution5000(?TBD) for 0.7" slit (undersampled and limited by optical performance)
3500 for 1.1" slit (2.1 spectral pixels per slit)
2800 for 1.5" slit
2500 for 1.7" slit
Gain3.5 e-/ADU +/- 20%
Read Noise18 electrons / sqrt(Nfowler)
Dark Current0.05 e-/s
Well/saturation Depth50000 DN = 180,000 electrons
Minimum Integration time (Nfowler * 0.8 + 0.3) sec on sky
(2*Nfowler * 0.8 +0.3) sec to estimate saturation
Spectrograph saturation magnitude4th (defocus for brighter objects)
Background limited exposure time~200+ sec
Slit viewer/ guider pixel scale (unbinned)0.245" / pixel
(175 pixel slit length)
Spectrograph spatial pixel scale 0.39"/pixel
(110 pixel slit length)
Guider/slitviewer bandpassKs only - fixed filter
Faintest practical source for acquisition in
the slit viewer
Ks ~ 17
Spectrograph continuum sensitivityJ, H, Ks = 17.0, 16.0, 15.5 5-sigma in one hour with 3 pixel spectral smoothing.
0.003 Janskys
(using 1.1" slit in good seeing)

TripleSpec mounted at the NA2 focus A spectrum of the dome floor lights through the protective plastic cover on TripleSpec. The wavelengths at the ends of the orders are labeled in the image. The orders, from top to bottom, are 3rd through 7th. A slitviewer/guider image, which encompasses a 4'x4' field. The slit is offset in the field but nearly centered on the optical axis of the telescope. This configuration enables the use of the rotator to search for guide stars in the rare event that one is not available in the default field of view.

2. Usage Overview: What to expect

Unlike visible wavelength spectroscopy, substantial airglow dominates the near-infrared portion of the spectrum, particularly at wavelengths longward of 1.5um. Beginning at 2.0um and longward a significant ambient thermal radiation component begins to contribute Poisson noise. The spectrum below illustrates these effects on a faint (J, H, Ks ~ 14 mag) object. The animation shows the star observed at two slit positions as is typical for TripleSpec observations. Evident are bright airglow emission lines filling the slit, particularly in the H-band (2nd from top) order. Wavelength increases to the left, and the rising thermal emission in the K-band order (top) is evident as well. Scattered high dark current pixels pepper the array. Pixels that blink on are off are cosmic ray hits. The exposure time for this image is 120 seconds.

Typically spectra are acquired at two slit positions and subtracted to suppress airglow line emission and thermal emission. The difference spectrum below shows the enhanced visibility of the spectrum in such a difference. Residual airglow lines are still present due to temporal variability in airglow, even on timescales of a few minutes. For longer integration near zenith, the small amount of flexure in the instrument (max 1 pixel) can also influence the self-subtraction of the airglow lines. Increasing Poisson noise from K-band thermal background is evident at the longest wavelengths (upper left).

3. Sensitivity and Performance

3.1. Spectrograph

3.1.a. GD153 - an empirical case study

Response in units of DN/s for GD153 (J=14.0, Ks=14.2). Counts have been binned where the source is detected in multiple orders.
SNR per pixel in 8x120s of integration on GD153.
Calibrated GD153 spectrum in Janskys.
3.1.b. The limits of detectability

The images below shows the K-band detection and extraction of a faint red source in one hour of integration time. During that hour the source was observed in twelve five-minute integrations, alternating in slit position ABBAABBAABBA. The count rate of 0.07 DN/s corresponds to a K=17.5 mag continuum. With three pixel spectral smoothing the continuum has an SNR=0.5 per smoothed spectral bin. In order to produce a spectrum bright enough for extraction, the five minute integrations had to be binned into 30 minute stacks at the "A" and "B" positions. Overall, this spectrum may not be very useful scientifically, but it does illustrate the limits of detecting and extracting a source spectrum under good conditions at the 3.5-meter.

Note that although the extracted continuum K-band magnitude is 17.5, the reported source K-band magnitude was 15.8. The observers struggled to guide on this faint target and the lower than expected detected magnitude is likely due to losses experienced in attempting to keep the light going down the slit.

The image result of differencing two 6x5 minute stacks of "A" vs. "B" position frames. The extracted source magnitude is consistent with a 17.5 mag Ks-band continuum. The SNR per sets of 3 binned spectral pixels in the H and K spectral orders. The K-band SNR here is about 0.5 per 3 pixel bin. The extracted spectrum in the H and K-band orders in units of DN/s. The spikes in the spectra are residual airglow lines contaminating the spectrum.

3.2. Slit viewer

The sensitivity of the slit viewer dictates the faintest source that can be observed directly and placed on the slit. Below this sensitivity threshold observers will have to depend on blind offsetting to place a source on the slit. In general, if a source is too faint to be seen in the slit viewer its continuum will be difficult to detect in the spectrograph. The integration time for the slit viewer is adjustable, but 30 seconds represents a maximum practical integration for positioning the source and for guiding. Longer integration times are possible, but the delay between exposures makes guiding and/or positioning the source on the slit tedious. In addition, since the slit viewer operates at Ks-band, significant thermal background accumlates during an exposure and will eventually saturate the array. The time to saturation is a strong function of ambient temperature. As a reference point, a recent observer found that the array was saturating in 45 seconds under warm (60F) conditions. Given blackbody emission at ambient temperature, the time to saturation will be four times longer at 32F. . The slit viewer is thus about a magnitude more sensitive under winter conditions than during the summer for the same integration time. Observers with extremely faint targets may wish to consider this fact in scheduling observations.

Once again GD153, K=14.2, provides a fiducial for slit viewer sensitivity. The frames below show, first, a raw guider frame with a bright source (not GD153) on the slit at the "B" position. The second figure shows a raw guider frame on a field containing many detectable faint sources (including GD153 just above the slit) - all of which are difficult to see in this view. As outlined below (see sections 4.2.a. and 5.1.c), collecting a background frame, shifting the field-of-view and subtracting that frame from subsequent frames removes all common-mode signals and provides a cleaner view of the sky. In this view (on the far right, with integration time of 15 seconds) the K=14.2 mag GD153 (just above the slit) is well-detected. The faintest stars readily visible are about 2.5 magnitudes fainter than GD153 or around K=16.5. With 30 second guider integrations it will be possible to see K=17 sources and place them on the slit. Longer guider integration times are likely to be unwieldy.

Boresite guiding requires sufficient spilled light to enable the guider to track the star (e.g. the leftmost figure below). The faintest start that provides sufficient spilled light has yet to be determined, but is probably in the range of Ks=13-14.

Guider sensitivity will depend on conditions - seeing and ambient temperature in particular. The example frames were obtained on a night with T=0C and sub-arcsecond K-band seeing and thus represent nearly the ultimate performance for this channel. At T=15C the system will be approximately 0.7 mag less sensitive than at T=0C under similar seeing conditions due to the increase in thermal background.

A guide frame from the observation of a bright calibrator. The target is at the "B" position on the slit. The dark features in the frame are either non-responsive pixels (circular region to the right) or defects in the surface of the silicon wafer mirror (e.g. above the slit).
A raw guider frame on a faint object. Field stars are present in this image, but hard to discern due to the pixel-to-pixel response variations combined with significant thermal illumination. The 14th mag target is visible, but is nearly lost because it falls near the reflective defect just above the slit. The same frame as in the adjacent figure, but this time a displaced frame of identical integration time has been subtracted. The subtraction removes the systematics of the illumination and reveals the faint stars. The telescope focus was slightly off optimal for this exposure. The slitviewer/guider has astigmatism. The good news is that defocus is readily evident and easily distinguishable from poor seeing. The bad news is that defocus is readily evident.

4. Practical Observing Guide

Given that the slitviewer/guider operates at Ks band and that the spectrograph has high spectral resolution, the sky is dark enough for source acquisition and sensitive spectroscopy when twilight is quite bright to the naked eye. Sunlight begins to interfere with five minute spectral integrations when the Sun is 6 degrees below the horizon. The Sun typically reaches this position 30 minutes after sunset or before sunrise. A TripleSpec night begins early and ends late. Users should be prepared for initial source acquisition shortly after sunset.

4.1. Observing Step-by-step

  1. Move telescope to target. Typically the source will appear within a few arcsecond of the slit. Since the field of view is 4'x4' it is unlikely the target will fall outside the field of view. (Note that the slit mirror has a few defects, one of which is close to the primary slit (1.1 arcsec)). On occasion, the target may land on the defect (or in the slit itself) rendering the source invisible if the target is faint. If the desired source is not evident, a few arcsecond offset may turn it up.
    • If the source is faint it may be necessary to detect it in a difference between two guider frames. See section 5.1.c for explicit instructions on how to initiate background subtraction from the TUI TripleSpec guide window.
  2. Place target in the "A" slit position.
    • Ctrl-left click if not already selected with green circle and marks on the target, then click Center Sel button to offset the telescope to the marked hotspot (which should be placed at the A position).
    • By convention the A position is about 1/3 slit length from the left edge of the slit as seen in the guider display. Similarly the "B" position is about 1/3 slit length in from the right end of the slit.The displacement between the A and B positions is about 20 arcseconds.
  3. Set the number of Fowler samples, integration time, and source name in the TripleSpec instrument/expose windows. Shorter integrations provide better immunity to airglow line variation, however, the background limit - set by the inter-line airglow continuum, is reached only after about 3 minutes of integration. Five minutes of frame integration time is a practical and useful upper limit.
  4. Either
    • Select an ABBA nod sequence (which should automate the positioning of the source at the alternating slit positions) or
    • Expose on the "A" position and manually offset and integrate for an ABBA sequence.
  5. Repeat as desired.

4.2. Source and Guide Star Acquisition

For bright sources, positioning a target on the slit is straightforward. Once a source is identified in the slit viewer, click Center Sel button to move the target to the "hotspot" location on the slit. Click Guide. The spilled light out of both sided of the slit should provide symmetrical guiding in boresite mode and integration can begin.

For faint sources attention will be required to maximize the source signal in the slit viewer images - which to 0th order is accomplished by increasing the frame integration time. There are two routes to obtaining optimal SNR in the slit viewer. The best practice remains to be determined.

4.2.a. Background subtraction

In the background subtraction mode a single frame is buffered and subsequently subtracted from each incoming guider frame. The subtraction removes all of the common mode structure that contaminates a raw frame and makes faint sources visible at the expense of providing a (+) and (-) image of each source. The telescope must be offset a few arcseconds following the acquisition of the background image otherwise sources will subtract from themselves making them invisible. Implementing the background subtraction mode with TUI is described below in Section 5.1.

4.2.b. Raw masked frames

The masks applied by the TUI guider have a pixel-to-pixel scaling that effectively flat fields the incoming frames. Typically, thermal infrared dominated frames are not simply flat-fielded because of structure arising from non-sky emission (consider the glow from a speck of dust on the window). For the sake of source acquisition and guiding such features are more of an annoyance and it may be possible to acquire even the faintest sources if the flat fielding is effective (and avoid the sqrt(2) noise penalty entailed by background subtraction). By the time of shared-risk observing it may be possible to do faint source acquisition on the masked (proc) guider frames.

4.3. Spectrum acquisition

The spectra above show that there is substantial airglow contamination across the TripleSpec bandpass. If consecutive exposures place a point source at two well-separated in-slit positions, subtracting these two spectra will, to first order, suppress the airglow line flux while maintaining the full signal from the target. The airglow line intensity can vary substantially even in the course of several minutes. In order to get good subtraction of the airglow lines integration times of less than 5 minutes are desirable. (In theory, the airglow should be removed in data processing as the slit region outside the source is fit and subtracted from the source. In practice the angle of the slit varies with respect to the dispersion direction making clean subtraction difficult - thus the desire to suppress/minimize the airglow signal.)

4.4. Seeing and Slit Exchange

TripleSpec has four available slits. The primary TripleSpec design implements a 2.3 pixel wide slit which corresponds to a cross-slit spatial dimension of 1.1 arcseconds. The three other slits are 0.7, 1.5, and 1.7 arcseconds wide. These four slits reside on a gold-coated silicon wafer slit mirror supported on an 8 position geneva gear mechanism. A pulldown menu in the TripleSpec TUI Configuration window permits selection of slits (or selection of blocked positions halfway between slits).

Due to the substantial airglow across the TripleSpec bandwidth there is a sensitivity penalty in addition to the resolution penalty incurred when using wider slits. The airglow lines become broader thus covering more of the spectrum. More flux is admitted into the instrument overall yielding more scattered light. If seeing allows, the 1.1 arcsec slit is optimal for observation. Although the 0.7 arcsec slit is even better in this regard, it subtends only 1.5 pixels and is undersampled. The figures below graphically illustrate the improvement in uncomtaminated spectral coverage vs. resolution.

Comparison of airglow contamination and its influence on SNR at R=500 vs R=3000. TripleSpec resolution does not go down to 500 in any of the slits. This figure is just illustrative of the effects of resolution on SNR. Evaluation of spectral coverage of airglow contamination as a function of spectral resolution. (see Martini and DePoy, SPIE, 2000).

The table below shows raw (2x2 binned) guide frames in each of the slits. The patterns from the slit mirror defects/mounts are evident in each case.

0.7 arcsec 1.1 arcsec 1.5 arcsec 1.7 arcsec

4.5. Fowler sampling, read noise, and minimum integration time

4.5.a. Fowler sampling and read noise

The HAWAII-2 spectrograph array can be read non-destructively multiple times during the course of an integration. Fowler sampling refers to conducting a burst of N readouts at the beginning of an integration and an equal burst of N readouts at the end of integration in order to suppress read noise (FowlerN). Read noise suppression can be important for TripleSpec, since the dark current is 0.05 e-/s and the inter-airglow line continuum is weak. For correlated double sampling (one read at the beginning of an integration and one at the end - also ``Fowler1") TripleSpec read noise is observed to be 5DN or 17 electrons. The TripleSpec TUI configuration menu permits the user to select a range for the number of Fowler samples. The TripleSpec read noise is observed to improve, as expected, with the square root of the number of Fowler samples. With Fowler8 the effective read noise is about 7 electrons. After the collection of 100 dark current or sky electrons these factors will dominate the read noise.

4.5.b Integration time and saturation

Integration/exposure times for direct readout devices can be non-intuitive since there is no shuttering and the conversion of the first and last pixels in one read of the device are staggered in time. For the TripleSpec HAWAII-2 array the electronics require 792 milliseconds to address all pixels on the array (in 16 128x1024 stripes of pixels read out in parallel). As an example, consider a Fowler1 integration. The array is reset, establishing the saturation level and the first pixel of first readout (actually 16 all at once) is read. 792 milliseconds later the last pixels of the read arrive. The image captured is thus staggered in time from one end of a stripe to the other by 0.8s. An 0.3 second delay is enforced prior to the second readout in order to avoid spurious ``shading" across the image. If the second readout begins immediately after this 0.3 sec delay (thus realizing the minimum integration time) the first pixel will be read out 1.1s after it was read the first time, and so on for all of the pixels on the array. Despite the fact that 1.9s was invested in acquiring the data, the image produced by differencing the two readouts has an on-sky exposure time of 1.1s. The beginning of the last readout started 1.1s after reset while the end occurred 1.9s after reset - the saturation threshold varies across the chip! Saturation should be considered including all of the readout time, not just the on-sky integration time. For Fowler1 the minimum on-sky integration time is 1.1s, but saturation should be presumed to be estimated from a virtual 1.9s exposure.

Generalizing to FowlerN, N*0.8s is required for the first readout sequence as well as for the second readout sequence. At minimum integration time, currently with an 0.3 second delay between the last pixel of the first sequence and the first pixel of the last sequence, 0.3+2*0.8*N seconds are required to execute the entire sequence while 0.3+0.8*N seconds of integration are obtained on sky (which can be seen also by subtracting pairwise the first read of the first group from the first read of the second group, and so on).

TripleSpec software accounts for the readout time in all Fowler modes such that the on-sky time will be the requested duration. This value will also appear as EXPTIME in the frame FITS header (another keyword INTDELAY provides the implemented delay interval between the last pixel of the first read and the first pixel of the last read).

The choice of N dictates the minimum on-sky integration time. A typical value is Fowler8 - enabling integrations as short as 6.7 seconds. Virtually all TripleSpec targets, including calibrator stars and calibration lamps, are observed with integration times longer than 10 sec. N=8 is the recommended Fowler setting for all TripleSpec data acquisition, unless exposures with duration less than 7 seconds are required. This is not the default setting, it needs to be set by the user.

The HAWAII-1 slitviewer/guider array could be read out in FowlerN mode, however the level of thermal background on the array produces thermal Poisson noise far in excess of the system read noise (also of order 17 electrons). In the interest of dynamic range and efficiency, the HAWAII-1 array only operates in Fowler1 (CDS) mode.

4.5.c Exposure sequence details

Matt Nelson has provided the following detailed breakdown of the exposure sequence:

1 - ICC receives exposure request
2 - ICC calculates and sets exposure time (SET cmd to controller)
3 - Controller finishes loop in Continuous Reset, Processes command
and replies to ICC.
4 - ICC initiates exposure in controller
5 - Controller finishes loop in Cont Reset, Breaks out of
loop to expose
6 - Controller does full pixel by pixel reset of array
7 - Controller Delays for reset settling
8 - Read-1 reads are made
9 - Controller waits for calculated Integration time
10 - Controller waits for 400mS for Array outputs to stabilize
11 - Read-2 reads are made
12 - ICC finished scavenging last Read-2 read, builds frame and
writes it to disc.
13 - ICC replies "done" to hub


Guesses about timing.

1-4 should be relatively fast. The line loops in continuous reset are
quite quick so I would expect this sequence to finish in < 10mS

5-6 was never timed by me. What I recall from the pixel clocks when I was developing the DSP code is that the reset pixel clock was running about 1/3 of a normal readout pixel clock. So I'd guess ball park 200-300 mSec for this

7 50mS
8 N*790mS
9 Exp Time - N*790ms
10 400mS
11 N*790mS

12-13 Unknown but fairly quick. Most of the frame data are scavenged and averaged while the pixels are still being read. it is just the recovery time of the last frame, subtraction of the Read1/2 the writing of the frame to disc. I'd estimate 100mS-200mS nominal timing.

Of course what is missing is the time required for the hub to cycle back around to requesting the next in the frame series. I'm certain the APO staff would have a good estimate. As a summary, the ICC and controller are probably using up 250+50+400+150mS = 850mS of time beyond the time spend during integration + readout. So for a rough estimate of instrument cycle time beyond the requested integration time 850+790*N mS should be close.

4.6. Dark Current and Frame Offset Level

The dark current in the spectrograph HAWAII-2 array has been measured on the mountain to be of order 0.05 e-/s or 15 e- in a 300s exposure. To first order dark current is unobservable in a 300s exposure, particularly because electronic offsets (e.g. the thermal drift of the cold output transistors) can be much larger than the few DN of dark current (e.g. a random 300s frame was observed to have an offset level of 130DN - virtually all electronic). The focal plane is quite dark between the orders. Raw frames may have a positive or negative offset in this region that is not due to electrons in the wells. Typically the subtraction of two consecutive frames (as is natural in processing ABBA observations) will surpress much of this electronic offset.

4.7. Linearity and Saturation

The spectrograph array saturates at a level of 52,000DN. Measurable (but small) linearity becomes apparent by a count level of 20,000DN. The plot below summarizes a continuum linearity test observing a constant background level at various integration times. A linear fit was made to the points having integration times between 2 and 8 seconds (count levels between 4000 and 13000 DN) which represents the most linear and reliably measured portion of the curve. The table below summarizes the quantiative non-linearity from this fit. The lines highlighted in green contributed to the linear fit. The short integration time points are deviant because the integration time offset was not precisely determined for these data.

Seconds Deviation Counts from Linear
---------------------------------
1.21 1.9% 2127
2.21 0.5% 3945
3.21 -0.2% 5774
4.21 -0.2% 7578
5.21 -0.1% 9371
7.21 0.1% 12942
10.21 -0.5% 18263
15.21 -0.9% 27091
20.21 -1.1% 35950
25.21 -2.5% 44260
30.21 -6.5% 50976


4.8. Focusing

Simply put, good focus is obtained by making the TripleSpec guider images round. The guider optical train has astigmatism that enters quickly as the telescope goes out of focus. The good news is that this astigmatism is in the guider optics and not in the spectrograph optics, so the astigmatism serves as a focus tool without influencing the quality of the star image that is actually going down the slit. Seen a different way, the guider image can look poor and astigmatic (within limits) yet the image is still optimal for the spectrograph. The position angle of the astigmatic image is a guide to the direction to move the focus (soon to be documented by the obs specs). In practice, it is probably better to adjust the guider images on the fly to remove any evidence of astigmatism rather than to focus using a script that drives the telescope well out of focus.

Update based on limited observations on UT080907: If the image appears elongated more-or-less parallel to the slit the focus needs to be made more negative in order to return the image to a circular shape.

K~10 stars make for good focus targets.

4.9. Spectrograph Frames under the Microscope

The image below shows a aggressive stretch of a deep (5 minute) TripleSpec spectrograph exposure. Evident is the thermal emission that covers the third order (K-band) and even a little of the long wavelength end (left side) of the fourth order). Atmospheric airglow is apparent in all orders, with the worst airglow appearing in the 4th order (H-band). This particular exposure was obtained in a dense field and multiple source spectra appear in the slit.

In addition to these "external" sources of light, the image also contains features resulting from electronics and internal scattering within the spectrograph.

Electronic ghosting: The most evident feature is the electronic crosstalk that appears when a bright source fills many rows/columns in one of the two array quadrants. This effect is most evident for the bright K-band order where emission filling the rows in in the left-hand quadrant produces an electronic ghost appearing as a vertical stripe of constant intensity in the right-hand quadrant. At a lower level, some of the bright spectral lines on the right-hand quadrant produce electronic ghost lines that cross the entire left-hand quadrant at constant intensity.

Optical ghosting: The brightest emission, specifically the K-band thermal emission, can be reflected about a point that is somewhat close to the center of the 2048x1024 array. This reflection produces an inverted stripe of emission that is evident in the right-hand quadrant just above the 6th order. This reflected strip ends in an intense bar this is acutually an image of some of the surface components and wirebonds on the detector wafer. Fainter reflection stripes are visible at a couple of other locations on the array.

Electronic quadrant offset/shading: At the level of a few DN the "bias" level on the detector can drift or be offset from one quadrant to another, producing a faint discontinuity across the quadrant boundaries.

All of these effects are repeatable from frame to frame and largely subtract out in the difference between two frames. The one place where residual features remain is the "stripe" electronic ghosts produced when observing bright standards. In this case, the level of ghosting is small compared with the source intensity, so the ghosts are of little consequence.

4.10. Array Persistence and Faint Targets

Bright sources produce an after-image on the array. This "persistence" image can linger for up to an hour following the observation of an extremely bright source. If a faint target is observed directly after a bright calibrator (e.g. K=7) the first few 5-minute exposures on the faint target may be contaminated with the spectrum of the calibrator (as a faint positive source in both the "A" and "B" positions). Observers should be careful to select fainter standards prior to faint source observations and should be aware of possible persistence contamination during data reduction.

5. Observing with TUI

Like DIS, TripleSpec uses independent TUI windows to position the source on the slit and acquire the spectra.

5.1. TripleSpec guiding with TUI

Choose "TSpec Slitviewer" from the Main TUI "Guide" pull-down menu. This guider window behaves functionally like any of the other TUI guider windows. Useful reference include:

Guider Match Scripts:

On Newton there is a script that can be run from the institutional accounts that will match up the times od the slitviewer images to your science images and create a log of each science frame with the nearest guide image and the range of guide frames if a range exists. This script is called: tcam_match. For more details on using this script please see: Guider Match info.

5.1.a. Binning

Although the guider hardware always reads a complete 1024x1024 frame, the displayed image can be software binned to save on bandwidth. Users will find that setting Bin=2 will produce the cleanest and most workable images. In particular, systematic pixel calibration errors lead to vertical "jailbarring" in the images that can be time variable. This effect is visible at Bin=1, but averages out at Bin=2. This advantage alone makes Bin=2 preferable for seeing fainter sources.

5.1.b. Sub-framing

The TripleSpec guider will deliver portions of the full instrument frame, once again saving on bandwidth for remote observers. The "Window" area on the guider screen permits the user to drag the frame edges to a desired location relative to a full frame. Pushing the "Full" button returns to a full-frame display. Alternatively, one can zoom in on the guider display with the mouse and then push the "View" button to adopt the current view as the window area.

5.1.c. Background Subtraction

When background subtraction is engaged the existing frame is stored in a buffer and then subtracted from all subsequent incoming frames. The guider screen provides two buttons to control background subraction. The text on the left side of the background subtract bar indicates the current state (e.g. "Bkgnd Sub On" or "Bkgnd Sub Off"). When background subtract is turned on the next frame to arrive will be the first frame that is background subtracted. In order to see sources the telscope must be offset between the frame buffered for background subtraction and the subsequent frames (otherwise the sources will subtract from themselves).

Note that pushing the "On" button in background subtract mode does not start a new guider integration. One must engage the background subtract mode and then press "Expose" if the guider is not running.

Typical sequence after slewing to a new source:

Important tip:Background subtraction only works well if the saved background frame is "fresh". Even after a few minutes a mismatch can develop between the saved background frame and the actual background due to airglow, temperature, and flexure. Background frames must also have an identical integration time to the incoming frames. A new background frame is required (by either stopping and restarting background subtraction or by pressing the "New" button) if

The TripleSpec TUI guider window. Functions/controls are similar to guiders for DIS/Echelle. Remote users will want to have 2x2 binning activated to minimize download time and to clean up odd-even column striping. The platescale of the array is fine enough that there is little penalty in resolution for running in the binned mode. Sub-framing is available to improve response time for remote observing. The detailed operation of this window is described in Section 5.1.
Main TripleSpec instrument TUI window showing configuration. In this window the number of Fowler samples can be set and the slit can be rotated to the desired position. Tip-Tilt mode refers to a future mode of the instrument where the spectrum can be steered at the sub-pixel level by a piezo-electric stage under one of the fold mirrors in the system. Note that the array power button should be left alone. It will likely be removed in future versions of the GUI. Users should find the system fully powered up and ready for operation after starting TUI. The "environment" button provides instrument internal temperatures and pressure.
TSpec Exposure window: Integration times are set and exposures initiated in this window. The "type" radio buttons simply set a FITS keyword for the recorded data. The system can take multiple exposures, ``#Exp" at the push of one button. This function is particularly useful for bright standards where a set of 5 exposures can be taken consecutively at the "A" slit position followed by 5 exposures at the "B" position to complete the observation. ``Filename" is the root file extension. For example, if "xxx" is chosen for the file name the resulting fits file will be "xxx.yyyy.fits" where "yyyy" is an incrementing frame number that increases steadily through the night.
Nod Script window: Obtained from the "Scripts" pull-down menu, this window has all of the functionality of the Expose window, but also includes a "cycles" option which currently drives the telescope in an "ABBA" slit position seqeuence for each cycle requested. At each "A" or "B" position "#Exp" exposures will be taken. For example, Cycles=2 with #Exp=4 will yield 32 frames - an ABBAABBA sequence with 4 exposures at each position.
6. Calibration

6.1. Flat fielding and wavelength calibration

Like any spectrograph, TripleSpec requires both continuum and line illumination for flat-field and spectral calibration. The Triplespectool data reduction code currently uses airglow lines for spectral calibration. Spectral lamp observations are not necessary, but many observers may like the security of having traditional lamp spectra in reserve. In order to use the airglow calibration method some of the spectra must be free of source flux in the middle of the slit. Since the natural observation procedure is to offset the source between two off-center slit positions, standard TripleSpec observations naturally provide for airglow wavelength calibration. In general, observers should be sure to have a few observations with only airglow at the slit center for wavelength calibration.

6.2. Telluric and flux calibration

6.3. Why no Dark Frames?

7. Data reduction - Triplespectool Appendix

0.1. Revision History

0.2 - first issue
0.2a - Serious swap of J and Ks sensitivities in the table below fixed
0.3/0.3a - Shared-risk user input accommodated including enhanced description of background subtract procedure.
0.3b - Added quantitative guidance for on-the-fly focusing based on astigmatism; added a section on persistence contaminating faint source observations (4.10)
0.4 - Updated calibrations section to account for the fact that Triplespectool now performs wavelength calibration based on airglow lines.
0.5 - Updated version of TSpecTool_guide available.
0.5b - Included section on detailed breakdown of events during an exposure sequence and resulting timing.
0.5c - "-0" problem in G2V and A0V standards files corrected and noted that it is possible to saturate the slit viewer in long exposures.
0.6 - Updated TSpecTool and TSpecTool_guide

0.2. Updates

2008JUL24: The rotator restriction on TripleSpec has been removed.